BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C10SP1|AL424941
(999 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1054 1810 0.0
>3x_Contig1054
Length = 4453
Score = 1810 bits (902), Expect = 0.0
Identities = 970/1001 (96%), Gaps = 5/1001 (0%)
Strand = Plus / Minus
Query: 1 gatcgttgttggaycacataaattcctcgatgaacggattctgcatccgtccagtatttg 60
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3892 gatcgttgttggatgacataaattcctcgatgaacggattctgcatccgtccagtatttg 3833
Query: 61 argcagaagacgttgagacatctgcrgctgcggctgcggctgcggccgs--tgccgtcat 118
| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 3832 aagcagaagacgttgagacatctgcagctgcggctgcggctgcggccgcactgccgtcat 3773
Query: 119 tataggvkctgacatgtsyccatccatatattgtgatctcagtgtcgagctttcattaat 178
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3772 tataggatctgacatgtgtccatccatatattgtgatctcagtgtcgagctttcattaat 3713
Query: 179 gccttccaaagtcctggttcttttcctcttggcagcaaaattctttgaggccatcgtcat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3712 gccttccaaagtcctggttcttttcctcttggcagcaaaattctttgaggccatcgtcat 3653
Query: 239 aaattagtttcctgcggtggaagaagcaatttctcaattaavamctgtgcacttgtccta 298
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 3652 aaattagtttcctgcggtggaagaagcaatttctcaattaaaaaatgtgcacttgtccta 3593
Query: 299 tgctttttctttactttagaaaggagaccttgatccctctcctgcaatgttattttattt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3592 tgctttttctttactttagaaaggagaccttgatccctctcctgcaatgttattttattt 3533
Query: 359 ttvaattgctaatctttcaatgataagcgcaaatccctcgtccagctaacactatacctc 418
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3532 ttaaattgctaatctttcaatgataagcgcaaatccctcgtccagctaacactatacctc 3473
Query: 419 gatgaaacgtacctgctctctctttaaatgtctgtttagctttgctgaacaagtggtctg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3472 gatgaaacgtacctgctctctctttaaatgtctgtttagctttgctgaacaagtggtctg 3413
Query: 479 ctaaaataatacttggcaaacaccgtcatttatatatrgtatatgtvtttattcttggag 538
|||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 3412 ctaaaataatacttggcaaacaccgttatttatatatagtatatgtatttattcttggag 3353
Query: 539 attaattaaattagtgaagaatcatggtttaatcatttcgaggggagaatccatcagaac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3352 attaattaaattagtgaagaatcatggtttaatcatttcgaggggagaatccatcagaac 3293
Query: 599 ggaaattttaccctgccaaccgangnntcnaaaaaaaaaaaaaaaaaaatttggcaaaaa 658
||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||
Sbjct: 3292 ggaaattttaccctgccaaccgatgattcaaaaaaaaaaaaaaaaaaaatttggcaaaaa 3233
Query: 659 cactcaagtgcaattttttcccaagavacggcagtgagaggagaaacaatacgtgcgtta 718
|||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 3232 cactcaagtgcaattttttcccaagaaacggcagtaagaggagaaacaatacgt-cgtta 3174
Query: 719 gatgcaatacggctacgtgggttattgattattaamcgttggttgttgtccatatatagc 778
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3173 gatgcaatacggctacgtgggttattgattattaaacgttggttgttgtccatatatagc 3114
Query: 779 tataaahhmgaacgtggtttgctagcttcttatgagcgtgcgagcaagagttgcatgggc 838
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3113 tataaaaaagaacgtggtttgctagcttcttatgagcgtgcgagcaagagttgcatgggc 3054
Query: 839 agccagcctaacctgatcccgataaacctcagctaccgagctgctctcttctgaagcggc 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3053 agccagcctaacctgatcccgataaacctcagctaccgagctgctctcttctgaagcggc 2994
Query: 899 tttgcaagggttacggatgatggtggtacgtaattataaagtgggtacgtctttgctggg 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2993 tttgcaagggttacggatgatggtggtacgtaattataaagtgggtacgtctttgctggg 2934
Query: 959 tgactggaa-ttcatgtttctgt-agattctcgggagggta 997
||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 2933 tgactggaatttcatgtttctgtaagattctcgggagggta 2893
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,801
Number of Sequences: 1807
Number of extensions: 18801
Number of successful extensions: 3674
Number of sequences better than 1.0e-20: 1
length of query: 999
length of database: 10,358,551
effective HSP length: 16
effective length of query: 983
effective length of database: 10,329,639
effective search space: 10154035137
effective search space used: 10154035137
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)